The detailed information of tRNA gene sequence


Sequence ID>A171001336
Genome IDCP001939
Search identical group
Phylum/ClassThermoproteota
SpeciesThermosphaera aggregans DSM 11486 [CP001939]
Start position on genome 1114312
End posion on genome 1114386
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aactattgga
tRNA gene sequence 
GGGCCCGTCGTCTAGCCTGGTATGGACGCCGCCCTCACACGGCGGAGGACCGGGGTTCAA
ATCCCCGCGGGCCCAttt
Downstream region at tRNA end position 
aaacactcgg
Secondary structure (Cloverleaf model)
>A171001336	Val	CAC
                   a      Attt aaacactcgg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G C C C C     A
    C C G A        C      | | | | |     A
  T         T C T G       C G G G G     C
  G         + | | |                 T T
  G         G G A C
    T A T          G     AGGAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.-

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