The detailed information of tRNA gene sequence


Sequence ID>A171001348
Genome IDCP001939
Search identical group
Phylum/ClassThermoproteota
SpeciesThermosphaera aggregans DSM 11486 [CP001939]
Start position on genome 3857
End posion on genome 3783
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
aatagcctgg
tRNA gene sequence 
GGGCCCGTAGCTCAGCATGGTAGAGCGGCGGGCTTTTAACCCGTAGGTCCCGGGTTCAAA
TCCCGGCGGGCCCGCat
Downstream region at tRNA end position 
acccttattt
Secondary structure (Cloverleaf model)
>A171001348	Lys	TTT
                   g      GCat acccttattt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    A       C T C G       C C G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.-

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