The detailed information of tRNA gene sequence


Sequence ID>A171001394
Genome IDCP001956
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloferax volcanii DS2 [CP001956]
Start position on genome 1836712
End posion on genome 1836784
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ctcaaaatgc
tRNA gene sequence 
GGGCCGGTGGGGTAGCTTGGTATCCTTCGGCCTTCGGGTGGCCGTAACCTCAGTTCGAAT
CTGAGCCGGCCCAtat
Downstream region at tRNA end position 
tctccccacc
Secondary structure (Cloverleaf model)
>A171001394	Pro	CGG
                   c      Atat tctccccacc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G A G T C     A
      C G A        G      | | | | |     G
    T       T G G G       C T C A G     C
    T         | | +                 T T
    G       T C C T
      G T A        T     TAAC
                    C - G
                    G - C
                    G - C
                    C - G
                    C - G
                  T       T
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.-

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