The detailed information of tRNA gene sequence


Sequence ID>A171001400
Genome IDCP001956
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloferax volcanii DS2 [CP001956]
Start position on genome 2626534
End posion on genome 2626618
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cccgtgtgaa
tRNA gene sequence 
GGTGGGATGGCGGAGTGGCCTAACGCGCCTGCCTTGAAAGCAGGTTTCCTCACGGAATCC
TGGGTTCAAATCCCAGTCCCACCGCat
Downstream region at tRNA end position 
tctgacgcga
Secondary structure (Cloverleaf model)
>A171001400	Ser	TGA
                   a      GCat tctgacgcga
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G A C C C     A
      T G A        G      | | | | |     A
    G       G G C G       C T G G G     C
    G         | | |                 T T
    C       A C G C
      C T A        G     TTTCCTCACGGAATC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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