The detailed information of tRNA gene sequence


Sequence ID>A171001416
Genome IDCP001956
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloferax volcanii DS2 [CP001956]
Start position on genome 1061565
End posion on genome 1061492
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
cagcgccgtg
tRNA gene sequence 
GGGCGTGTGGCCTAGTGGACAGGGCGAGAGGTTCCTAACCTCTCGATCGCGGGTTCGAAT
CCCGTCACGCCCGCtt
Downstream region at tRNA end position 
ctctcactgc
Secondary structure (Cloverleaf model)
>A171001416	Arg	CCT
                   g      GCtt ctctcactgc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C          T A
                    T     T G C C C     A
      T G A        G      + | | | |     G
    G       T C C G       G C G G G     C
    G       + | | |                 T T
    A       G G G C
      C A          G     CGATC
                    A - T
                    G - C
                    A - T
                    G - C
                    G - C
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.-

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