The detailed information of tRNA gene sequence


Sequence ID>A171001463
Genome IDCP001994
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanohalophilus mahii DSM 5219 [CP001994]
Start position on genome 1354513
End posion on genome 1354428
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aatcatattT
tRNA gene sequence 
GCTGAGGTAGTCTAGCGGTACGGCGCAAGCCTGGAAAGCTTGTGGGGCTTGACCCCTCGG
GAGTTCGAATCTCCCCCTCAGCGTCt
Downstream region at tRNA end position 
ctccttttct
Secondary structure (Cloverleaf model)
>A171001463	Ser	GGA
                   T      GTCt ctccttttct
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
        G A        A      | | | | |     G
      C     T C T G       G G G A G     C
      G       | + |                 T T
      G     C G G C
        T A        G     TGGGGCTTGACCCCTC
                    C - G
                    A - T
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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