The detailed information of tRNA gene sequence


Sequence ID>A171001475
Genome IDCP002009
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocaldococcus infernus ME [CP002009]
Start position on genome 279368
End posion on genome 279445
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
tgttttgtga
tRNA gene sequence 
GGACCCGTAGCCTAGCCTGGATAGGGCACCGGCCTTCTAAGCCGGGGGTCGGGGGTTCAA
ATCCCCCCGGGTCCGCCA
Downstream region at tRNA end position 
ctttgttaac
Secondary structure (Cloverleaf model)
>A171001475	Arg	TCT
                   a      GCCA ctttgttaac
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C C C C C     A
    C C G A        A      | | | | |     A
  T         T C C G       G G G G G     C
  G         + | | |                 T T
  G         G G G C
    A T A          A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.-

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