The detailed information of tRNA gene sequence


Sequence ID>A171001507
Genome IDCP002009
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocaldococcus infernus ME [CP002009]
Start position on genome 115613
End posion on genome 115539
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
gaactttaaa
tRNA gene sequence 
GCCCTGGTAGTTTAGCCCGGACAGAACGGGGGACTTCGGATCCCCAGACCCGGGTTCAAA
TCCCGGCCAGGGCTCtt
Downstream region at tRNA end position 
tttgtgagaa
Secondary structure (Cloverleaf model)
>A171001507	Arg	TCG
                   a      TCtt tttgtgagaa
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  C         T T T G       C C G G G     C
  G         + | | |                 T T
  G         G A A C
    A C A          G     AGAC
                    G - C
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.-

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