The detailed information of tRNA gene sequence


Sequence ID>A171001575
Genome IDCP002062
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalalkalicoccus jeotgali B3 [CP002062]
Start position on genome 1629752
End posion on genome 1629827
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
tacgggacga
tRNA gene sequence 
GCCAGAGGAGCTTGGGCGGTTCAAGCACCCGACTTGTAATCGGGAGTTCGGGGGTTCAAA
TCCCTCCTCTGGCTCCt
Downstream region at tRNA end position 
ttcgattcgt
Secondary structure (Cloverleaf model)
>A171001575	Thr	TGT
                   a      TCCt ttcgattcgt
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    G     C T C C C     A
      G G G        A      | + | | |     A
    C       T T C G       G G G G G     C
    G       | | | |                 T T
    G       A A G C
      T T C        A     AGTTC
                    C - G
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.-

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