The detailed information of tRNA gene sequence


Sequence ID>A171001653
Genome IDCP002098
Search identical group
Phylum/ClassThermoproteota
SpeciesIgnisphaera aggregans DSM 17230 [CP002098]
Start position on genome 188170
End posion on genome 188256
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
gaggatcaaT
tRNA gene sequence 
GCGGGGGTGCCCGAGCTAGGCCAAAGGGGGCGGGCTCAAGACCCGCTGGCGAAGGCCTGC
GTGGGTTCAAATCCCACCCCCCGCATta
Downstream region at tRNA end position 
atcattctta
Secondary structure (Cloverleaf model)
>A171001653	Leu	CAA
                   T      ATta atcattctta
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T C G A        G      | | | | |     A
  A         G C C C       G T G G G     C
  G           | | |                 T T
  G         A G G G
    C C A A        G     TGGCGAAGGCCTGC
                    G - C
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.-

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