The detailed information of tRNA gene sequence


Sequence ID>A171001671
Genome IDCP002098
Search identical group
Phylum/ClassThermoproteota
SpeciesIgnisphaera aggregans DSM 17230 [CP002098]
Start position on genome 1203303
End posion on genome 1203228
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
atatagagcT
tRNA gene sequence 
GGGCCCGTAGCTCAGTCTGGCAGAGCGCCCGGCTGATAACCGGGAGGTCGGGGGTTCAAA
TCCCCCCGGGCCCATgt
Downstream region at tRNA end position 
atttcagcat
Secondary structure (Cloverleaf model)
>A171001671	Ile	GAT
                   T      ATgt atttcagcat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C C C C C     A
      T G A        A      | | | | |     A
    C       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        G     AGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.-

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