The detailed information of tRNA gene sequence


Sequence ID>A171001675
Genome IDCP002098
Search identical group
Phylum/ClassThermoproteota
SpeciesIgnisphaera aggregans DSM 17230 [CP002098]
Start position on genome 1082236
End posion on genome 1082159
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
caaatagaaa
tRNA gene sequence 
GGGCCCGTAGCTCAGCCAGGACAGAGCGCCGGCCTTCTAAGCCGGTGGTCCGGGGTTCGA
ATCCCCGCGGGCCCGCCA
Downstream region at tRNA end position 
cagaattgga
Secondary structure (Cloverleaf model)
>A171001675	Arg	TCT
                   a      GCCA cagaattgga
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G C C C C     A
    C C G A        A      | | | | |     G
  A         C T C G       C G G G G     C
  G         | | | |                 T T
  G         G A G C
    A C A          G     TGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.-

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