The detailed information of tRNA gene sequence


Sequence ID>A171001680
Genome IDCP002098
Search identical group
Phylum/ClassThermoproteota
SpeciesIgnisphaera aggregans DSM 17230 [CP002098]
Start position on genome 45831
End posion on genome 45756
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
agatattttA
tRNA gene sequence 
GCCGCGGTAGCTCAGCCTGGTGGAGCGCCGCCCTGGTAAGGCGGAGGTCCCGGGTTCAAA
TCCCGGCCGCGGCTTat
Downstream region at tRNA end position 
ctataatgat
Secondary structure (Cloverleaf model)
>A171001680	Thr	GGT
                   A      TTat ctataatgat
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    C       C T C G       C C G G G     C
    T       | | | |                 T T
    G       G A G C
      G T G        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.-

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