The detailed information of tRNA gene sequence


Sequence ID>A171001682
Genome IDCP002098
Search identical group
Phylum/ClassThermoproteota
SpeciesIgnisphaera aggregans DSM 17230 [CP002098]
Start position on genome 623
End posion on genome 548
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ttaatagcgt
tRNA gene sequence 
GGGCCGGTAGCTCAGCTGGAAGAGCGCTCGGTTCGCACCCGAGAGGTCCCGGGTTCAAAT
CCCGGCCGGTCCACCA
Downstream region at tRNA end position 
tcaaatctta
Secondary structure (Cloverleaf model)
>A171001682	Ala	CGC
                   t      ACCA tcaaatctta
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    T       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      A A          G     AGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.-

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