The detailed information of tRNA gene sequence


Sequence ID>A171001788
Genome IDCP002117
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanolacinia petrolearia DSM 11571 [CP002117]
Start position on genome 211653
End posion on genome 211569
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
attattattt
tRNA gene sequence 
GCCGAGATAGTCTAGTCCGGGAAGGCGGTAGCCTCGAAAGCTACTGGTGTCCGCACCTCG
GGAGTTCAAATCTCCCTCTCGGCGCtt
Downstream region at tRNA end position 
ttgtgttttt
Secondary structure (Cloverleaf model)
>A171001788	Ser	CGA
                   t      GCtt ttgtgttttt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C T C     A
      T G A        A      | | | | |     A
    C       T C T G       G G G A G     C
    C       | | + |                 T T
    G       A G G C
      G G A        G     TGGTGTCCGCACCTC
                    G - C
                    T - A
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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