The detailed information of tRNA gene sequence


Sequence ID>A171001821
Genome IDCP002278
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothermus fervidus DSM 2088 [CP002278]
Start position on genome 388319
End posion on genome 388244
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
atattttgaT
tRNA gene sequence 
GGGCTGGTAGCTCAGCTTGGTAGAGCGTCGCCTTGGCATGGCGAAGGCCCCGGGTTCAAA
TCCCGGCCAGTCCATta
Downstream region at tRNA end position 
attttcacat
Secondary structure (Cloverleaf model)
>A171001821	Ala	GGC
                   T      ATta attttcacat
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    T       C T C G       C C G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGCC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.-

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