The detailed information of tRNA gene sequence


Sequence ID>A171001904
Genome IDCP002408
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrososphaera gargensis Ga9.2 [CP002408]
Start position on genome 1973293
End posion on genome 1973367
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gctcttcgtc
tRNA gene sequence 
GGGGTCGTTGTCTAGCTTGGTATGATGCCAGCCTTGGGCGCTGGAGGCCGCTGGTTCGAA
TCCGGCCGACCCCACtc
Downstream region at tRNA end position 
tattttgtac
Secondary structure (Cloverleaf model)
>A171001904	Pro	TGG
                   c      ACtc tattttgtac
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     C G G C C     A
      C G A        T      | | + | |     G
    T       T C T G       G C T G G     C
    T         | | +                 T T
    G       T G A T
      G T A        G     AGGCC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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