The detailed information of tRNA gene sequence


Sequence ID>A171001992
Genome IDCP002535
Search identical group
Phylum/ClassThermoproteota
SpeciesAcidianus hospitalis W1 [CP002535]
Start position on genome 732043
End posion on genome 732117
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ttagaatatt
tRNA gene sequence 
GGGCCGGTAGCTCAGCCTGGAAGAGTGTCCGGCTTGCAACCGGAAGGTCCCGGGTTCAAA
TCCCGGCCGGTCCACtc
Downstream region at tRNA end position 
tgggggatac
Secondary structure (Cloverleaf model)
>A171001992	Ala	TGC
                   t      ACtc tgggggatac
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    C       C T C G       C C G G G     C
    T       | | | +                 T T
    G       G A G T
      G A A        G     AGGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.-

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