The detailed information of tRNA gene sequence


Sequence ID>A171002001
Genome IDCP002535
Search identical group
Phylum/ClassThermoproteota
SpeciesAcidianus hospitalis W1 [CP002535]
Start position on genome 1115917
End posion on genome 1115994
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ctgataatgt
tRNA gene sequence 
GGACCCGTAGCTCAGCCAGGATAGAGCGCCGGCCTTCTAAGTCGGTGGTCACGGGTTCGA
ATCCCGTCGGGTCCGCCA
Downstream region at tRNA end position 
cattatatga
Secondary structure (Cloverleaf model)
>A171002001	Arg	TCT
                   t      GCCA cattatatga
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G C C C     A
    C C G A        A      | | | | |     G
  A         C T C G       A C G G G     C
  G         | | | |                 T T
  G         G A G C
    A T A          G     TGGTC
                    C - G
                    C - G
                    G - C
                    G + T
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.-

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