The detailed information of tRNA gene sequence


Sequence ID>A171002059
Genome IDCP002565
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothrix soehngenii GP6 [CP002565]
Start position on genome 684822
End posion on genome 684896
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
cgagaggtgt
tRNA gene sequence 
GCCTCGGTAGCTCAGCTGGTCCAGAGCGATTGACTTGTAATCAATAGGTCGCGTGTTCGA
ATCACGCTCGGGGCTttt
Downstream region at tRNA end position 
ctttaaaaaa
Secondary structure (Cloverleaf model)
>A171002059	Thr	TGT
                   t      Tttt ctttaaaaaa
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C
                     G + T          T A
                    T     C G C A C     A
    T C G A        A      | | | | |     G
  G         C T C G       G C G T G     C
  G         | | | |                 T T
  T         G A G C
    C C A          G     AGGTC
                    A - T
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.-

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