The detailed information of tRNA gene sequence


Sequence ID>A171002067
Genome IDCP002565
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothrix soehngenii GP6 [CP002565]
Start position on genome 1701422
End posion on genome 1701507
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gagggtcaga
tRNA gene sequence 
GTCGAGGTCGCCTAGCTTGGTATGGCGCAGGTTTGCTAAACCTGTTCCGCTCCGCGGATC
GTGGGTTCGAATCCCACCCTCGGCGCta
Downstream region at tRNA end position 
ttttaccagt
Secondary structure (Cloverleaf model)
>A171002067	Ser	GCT
                   a      GCta ttttaccagt
                     G - C
                     T + G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        C      | | | | |     G
    T       T C C G       G T G G G     C
    T         | | |                 T T
    G       T G G C
      G T A        G     TTCCGCTCCGCGGATC
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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