The detailed information of tRNA gene sequence


Sequence ID>A171002072
Genome IDCP002565
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothrix soehngenii GP6 [CP002565]
Start position on genome 2191726
End posion on genome 2191652
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ccagtagaag
tRNA gene sequence 
GGGGTTGTAGGGTAGCCTGGTCCATCCTACAGCGTTCGGGACGCTGTGACCTGAGTTCGA
ATCTCAGCAACCCCAtca
Downstream region at tRNA end position 
tactcttcct
Secondary structure (Cloverleaf model)
>A171002072	Pro	CGG
                   g      Atca tactcttcct
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C          T A
                    T     G A C T C     A
    C C G A        A      | | | | |     G
  T         T G G G       C T G A G     C
  G           | | +                 T T
  G         T C C T
    T C C A        A     TGAC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.-

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