The detailed information of tRNA gene sequence


Sequence ID>A171002076
Genome IDCP002565
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothrix soehngenii GP6 [CP002565]
Start position on genome 1756024
End posion on genome 1755950
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ccccatccgc
tRNA gene sequence 
GCTCCGGTAGTGTAGCTCGGCCAATCATGTAGGACTCTCACTCCTTCGACTTGGGTTCAA
ATCCCAACCGGAGCAtga
Downstream region at tRNA end position 
atttccaatt
Secondary structure (Cloverleaf model)
>A171002076	Glu	CTC
                   c      Atga atttccaatt
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     A A C C C     A
    T C G A        A      | | | | |     A
  C         T G T G       T T G G G     C
  G           | | +                 T T
  G         T C A T
    C C A A        G     CGAC
                    T   T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.-

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