The detailed information of tRNA gene sequence


Sequence ID>A171002235
Genome IDCP002772
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanobacterium paludis SWAN1 [CP002772]
Start position on genome 261602
End posion on genome 261676
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
agctaaaaat
tRNA gene sequence 
GCCTCGGTAGCTCAGTCTGGTGGAGCGCGAGACTTGTAATCTCGTGGTCGTGGGTTCAAT
TCCCACCCGGGGCTCta
Downstream region at tRNA end position 
agctccacca
Secondary structure (Cloverleaf model)
>A171002235	Thr	TGT
                   t      TCta agctccacca
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C
                     G - C          T T
                    T     C A C C C     A
      T G A        A      | | | | |     A
    C       C T C G       G T G G G     C
    T       | | | |                 T T
    G       G A G C
      G T G        G     TGGTC
                    C - G
                    G - C
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.-

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