The detailed information of tRNA gene sequence


Sequence ID>A171002256
Genome IDCP002772
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanobacterium paludis SWAN1 [CP002772]
Start position on genome 2346180
End posion on genome 2346106
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
attgtcttac
tRNA gene sequence 
AGCGGGGTGGGGTAGTCTGGTAATCCCGCGGGGCTCATAACCCCGAGAGCCCTAGTTCAA
ATCTAGGCCCCGCTAttt
Downstream region at tRNA end position 
ttactttttg
Secondary structure (Cloverleaf model)
>A171002256	Met	CAT
                   c      Attt ttactttttg
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G A T C     A
    C T G A        G      | | | | |     A
  T         T G G G       C C T A G     C
  G           | | |                 T T
  G         T C C C
    T A A          G     AGAGC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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