The detailed information of tRNA gene sequence


Sequence ID>A171002257
Genome IDCP002772
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanobacterium paludis SWAN1 [CP002772]
Start position on genome 2297216
End posion on genome 2297143
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttataactaA
tRNA gene sequence 
GCCAAGGTAGCTTAGAGGCGAAGCGATGGACTGCAGATCCATTACACGGGAGTTCAAATC
TCTCCCTTGGCTTta
Downstream region at tRNA end position 
aaataattta
Secondary structure (Cloverleaf model)
>A171002257	Cys	GCA
                   A      TTta aaataattta
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C T C T C     A
        G A        A      | + | | |     A
      A     T T C G       G G G A G     C
      G     | | | |                 T T
      G     A A G C
        C G        G     TACAC
                    A - T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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