The detailed information of tRNA gene sequence


Sequence ID>A171002258
Genome IDCP002772
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanobacterium paludis SWAN1 [CP002772]
Start position on genome 2099909
End posion on genome 2099823
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tgtttcataT
tRNA gene sequence 
GCCGGGATAGTCTAGTCTGGGAAGGCGCAGGATTCGAAATCCTGTTGAGCATTGCTCATC
CTGGGTTCAAATCCCAGTCCCGGCGTta
Downstream region at tRNA end position 
attatttttt
Secondary structure (Cloverleaf model)
>A171002258	Ser	CGA
                   T      GTta attatttttt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G A C C C     A
      T G A        A      | | | | |     A
    C       T C T G       C T G G G     C
    T       | | + |                 T T
    G       A G G C
      G G A        G     TTGAGCATTGCTCATC
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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