The detailed information of tRNA gene sequence


Sequence ID>A171002303
Genome IDCP002779
Search identical group
Phylum/ClassEuryarchaeota
SpeciesPyrococcus yayanosii CH1 [CP002779]
Start position on genome 1624584
End posion on genome 1624661
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
ctcttcccag
tRNA gene sequence 
GGGCCCGTAGTTTAGCCAGGATAGAACGCCGGCCTTCGGAGCCGGAGGTCGCGGGTTCAA
ATCCCGCCGGGCCCGCCA
Downstream region at tRNA end position 
cattctttga
Secondary structure (Cloverleaf model)
>A171002303	Arg	TCG
                   g      GCCA cattctttga
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G C C C     A
    C C G A        A      | | | | |     A
  A         T T T G       G C G G G     C
  G         + | | |                 T T
  G         G A A C
    A T A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.-

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