The detailed information of tRNA gene sequence


Sequence ID>A171002311
Genome IDCP002779
Search identical group
Phylum/ClassEuryarchaeota
SpeciesPyrococcus yayanosii CH1 [CP002779]
Start position on genome 1128215
End posion on genome 1128138
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
gctgagcgcg
tRNA gene sequence 
GCCGGGGTGGTGTAGCCTGGTCTAGCACACGGGACTGTGGATCCCGTAGCCCGGGTTCAA
ATCCCGGCCCCGGCCCCA
Downstream region at tRNA end position 
gaactcttga
Secondary structure (Cloverleaf model)
>A171002311	His	GTG
                   g      CCCA gaactcttga
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        G      | | | | |     A
  T         T G T G       C C G G G     C
  G         + | | |                 T T
  G         G C A C
    T C T A        A     TAGC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.-

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