The detailed information of tRNA gene sequence


Sequence ID>A171002314
Genome IDCP002779
Search identical group
Phylum/ClassEuryarchaeota
SpeciesPyrococcus yayanosii CH1 [CP002779]
Start position on genome 616487
End posion on genome 616402
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tatctcgcag
tRNA gene sequence 
GCCGGGGTAGCCTAGCCAGGGAAGGCGCGGGACTCGAGATCCCGTGGGCGTTGCCCACCG
GGGTTCAAATCCCCGCCCCGGCGCCA
Downstream region at tRNA end position 
cctgccgagc
Secondary structure (Cloverleaf model)
>A171002314	Ser	CGA
                   g      GCCA cctgccgagc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G C C C C     A
      C G A        A      | | | | |     A
    C       T C C G       C G G G G     C
    A       | | | |                 T T
    G       A G G C
      G G A        G     TGGGCGTTGCCCAC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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