The detailed information of tRNA gene sequence


Sequence ID>A171002329
Genome IDCP002792
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothermococcus okinawensis IH1 [CP002792]
Start position on genome 540315
End posion on genome 540391
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tattgctatT
tRNA gene sequence 
GCTCCAGTGGTGTAGTCCGGCCAATCATGCGGGCCTTTCGAGCCCGCGACTCGGGTTCAA
ATCCCGGCTGGAGCATtt
Downstream region at tRNA end position 
tatttaaata
Secondary structure (Cloverleaf model)
>A171002329	Glu	TTC
                   T      ATtt tatttaaata
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     G G C C C     A
    C T G A        G      + | | | |     A
  C         T G T G       T C G G G     C
  G           | | +                 T T
  G         T C A T
    C C A A        G     CGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.-

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