The detailed information of tRNA gene sequence


Sequence ID>A171002334
Genome IDCP002792
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothermococcus okinawensis IH1 [CP002792]
Start position on genome 1040349
End posion on genome 1040424
Amino Acid Arg
Anticodon GCG
Upstream region at tRNA start position
aatagaataT
tRNA gene sequence
GCCCCTGTGGGTTAGTCAGGACATGCTTGCGAACTGCGGATTCGCCGACCCGGGTTCAAA
TCCCGGCAGGGGCGTta
Downstream region at tRNA end position
tatattttta
Secondary structure (Cloverleaf model)
>A171002334	Arg	GCG
                   T      GTta tatattttta
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     G G C C C     A
    C T G A        G      | | | | |     A
  A         T T G G       C C G G G     C
  G           + | +                 T T
  G         T G C T
    A C A          T     CGAC
                    G - C
                    C - G
                    G - C
                    A - T
                    A - T
                  C       A
                  T       G
                    G C G
Intron
Comment/Decision
Genome/Seq. Info.-

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