The detailed information of tRNA gene sequence


Sequence ID>A171002338
Genome IDCP002792
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothermococcus okinawensis IH1 [CP002792]
Start position on genome 1026720
End posion on genome 1026643
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tttattatta
tRNA gene sequence 
GGGACTGTGGGGTAGCCTGGTCCATCCTGTGCGTCTGGGGGGCGTGCAACCCGAGTTCAA
ATCTCGGCAGTCCCACCA
Downstream region at tRNA end position 
tttataataa
Secondary structure (Cloverleaf model)
>A171002338	Pro	GGG
                   a      ACCA tttataataa
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     T - A
                     G - C          T A
                    T     G G C T C     A
    C C G A        G      | | | | |     A
  T         T G G G       C C G A G     C
  G         | + | |                 T T
  G         A T C C
    T C C          T     GCAAC
                    G + T
                    T + G
                    G - C
                    C - G
                    G   G
                  T       G
                  C       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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