The detailed information of tRNA gene sequence


Sequence ID>A171002406
Genome IDCP002818
Search identical group
Phylum/ClassThermoproteota
SpeciesSulfolobus acidocaldarius Ron12/I [CP002818]
Start position on genome 48109
End posion on genome 48034
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position
gttatagtga
tRNA gene sequence
GGGGCCGTAGTCTAGCTTGGACTAGGATGCCAGGCTTGGGCCCTGGTGGTCCCGGGTTCA
AATCCCGGCGGCCCCAgac
Downstream region at tRNA end position
taaaaaattt
Secondary structure (Cloverleaf model)
>A171002406	Pro	TGG
                   a      Agac taaaaaattt
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    T C G A        A      | | | | |     A
  T         T C T G       C C G G G     C
  G         + | | +                 T T
  G         G G A T
    A C T A        G     TGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  C       C
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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