The detailed information of tRNA gene sequence


Sequence ID>A171002422
Genome IDCP002838
Search identical group
Phylum/ClassThermoproteota
SpeciesPyrolobus fumarii 1A [CP002838]
Start position on genome 1033566
End posion on genome 1033643
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ggaccataca
tRNA gene sequence 
GGGCCCGTAGCCTAGCCAGGATAGGGCGCCGGCCTTCTAAGCCGGTAGTCCGGGGTTCAA
ATCCCCGCGGGCCCGCCA
Downstream region at tRNA end position 
aacctgttct
Secondary structure (Cloverleaf model)
>A171002422	Arg	TCT
                   a      GCCA aacctgttct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G C C C C     A
    C C G A        A      | | | | |     A
  A         T C C G       C G G G G     C
  G         + | | |                 T T
  G         G G G C
    A T A          G     TAGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.-

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