The detailed information of tRNA gene sequence


Sequence ID>A171002433
Genome IDCP002838
Search identical group
Phylum/ClassThermoproteota
SpeciesPyrolobus fumarii 1A [CP002838]
Start position on genome 786634
End posion on genome 786558
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggggtagggg
tRNA gene sequence 
AGCGGGGTAGGGTAGCCTGGTAGCCCGCGGGGCTCATAACCCCGAGATCGGTGGTTCAAA
TCCACCCCCCGCTACCA
Downstream region at tRNA end position 
acgcgggccc
Secondary structure (Cloverleaf model)
>A171002433	Met	CAT
                   g      ACCA acgcgggccc
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C A C C     A
      C G A        A      | | | | |     A
    C       T G G G       G G T G G     C
    T       + | | |                 T T
    G       G C C C
      G T A        G     AGATC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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