The detailed information of tRNA gene sequence


Sequence ID>A171002444
Genome IDCP002839
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalopiger xanaduensis SH-6 [CP002839]
Start position on genome 96087
End posion on genome 96161
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gtcagcctgc
tRNA gene sequence 
GGGTTGGTGATCTAGTCCGGTTATGATACCTCCTTCACACGGAGGAAGCCGGCGGTTCAA
ATCCGCCCCAACCCAttt
Downstream region at tRNA end position 
ttcgagcgac
Secondary structure (Cloverleaf model)
>A171002444	Val	CAC
                   c      Attt ttcgagcgac
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C
                     G - C          T A
                    T     C C G C C     A
    C T G A        G      | | | | |     A
  C         T C T A       G G C G G     C
  G           | | |                 T T
  G         T G A T
    T T A          A     AAGCC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.-

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