The detailed information of tRNA gene sequence


Sequence ID>A171002449
Genome IDCP002839
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalopiger xanaduensis SH-6 [CP002839]
Start position on genome 1107033
End posion on genome 1107105
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
cgcaagcgtg
tRNA gene sequence 
TCCGGGTTGGGGTAGTGGTTATCCTTCAGCCTTGTGGAGGCTGAGACGCGGGTTCGATTC
TCGCACCCGGACCtt
Downstream region at tRNA end position 
ctgtggcgaa
Secondary structure (Cloverleaf model)
>A171002449	His	GTG
                   g      CCtt ctgtggcgaa
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A          T T
                    T     C G C T C     A
      T G A        G      | | | + |     G
    G       T G G G       G C G G G     C
    G         | | +                 T T
    T       T C C T
      T A          T     AGAC
                    C - G
                    A - T
                    G - C
                    C - G
                    C - G
                  T       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.-

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