The detailed information of tRNA gene sequence


Sequence ID>A171002465
Genome IDCP002839
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalopiger xanaduensis SH-6 [CP002839]
Start position on genome 2551764
End posion on genome 2551690
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
gcagatgcaa
tRNA gene sequence 
GGGCCGGTAGCTCAGTCCGGCAGAGCGTCTGACTCTTAATCAGACGGTCGCGTGTTCAAA
TCGCGCCCGGCCCGCtt
Downstream region at tRNA end position 
tcctgtcgcg
Secondary structure (Cloverleaf model)
>A171002465	Lys	CTT
                   a      GCtt tcctgtcgcg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C G C G C     A
      T G A        A      | | | + |     A
    C       C T C G       G C G T G     C
    C       | | | |                 T T
    G       G A G C
      G C A        G     CGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.-

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