The detailed information of tRNA gene sequence


Sequence ID>A171002466
Genome IDCP002839
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalopiger xanaduensis SH-6 [CP002839]
Start position on genome 2503629
End posion on genome 2503545
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gaggtggtga
tRNA gene sequence 
GGTGGGGTAGCGAAGCGGCCCAACGCGCCTGCCTTGAGAGCAGGTGGCTGTATAGCCTCA
TGGGTTCAAATCCCATCCCCACCGCtt
Downstream region at tRNA end position 
ctgcgacgaa
Secondary structure (Cloverleaf model)
>A171002466	Ser	TGA
                   a      GCtt ctgcgacgaa
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A C C C     A
      C G A        A      | | | | |     A
    G       A G C G       A T G G G     C
    G         | | |                 T T
    C       A C G C
      C C A        G     TGGCTGTATAGCCTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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