The detailed information of tRNA gene sequence


Sequence ID>A171002468
Genome IDCP002839
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalopiger xanaduensis SH-6 [CP002839]
Start position on genome 1892888
End posion on genome 1892815
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ggtttttccg
tRNA gene sequence 
GGGCGTGTGGCCTAGCGGAGAGGGCAGAAGGTTCCTAACCTTCTGATCGTGGGTTCGAAT
CCCGCCACGCCCGCtc
Downstream region at tRNA end position 
gcgacgaaca
Secondary structure (Cloverleaf model)
>A171002468	Arg	CCT
                   g      GCtc gcgacgaaca
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | + | | |     G
    G       T C C G       G T G G G     C
    G       + | | |                 T T
    A       G G G C
      G A          A     TGATC
                    G - C
                    A - T
                    A - T
                    G - C
                    G - C
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.-

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