The detailed information of tRNA gene sequence


Sequence ID>A171002529
Genome IDCP002916
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon BRNA1 [CP002916]
Start position on genome 721670
End posion on genome 721755
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agtgggacga
tRNA gene sequence 
GCGGAAGTGGCTCAGTGGACTACTACGCCGGTCTTGAAAACCGGCGGCGATTCGCCTCGG
GAGTTCGAATCTCCCCTTCCGCGCCA
Downstream region at tRNA end position 
ttttaccaac
Secondary structure (Cloverleaf model)
>A171002529	Ser	TGA
                   a      GCCA ttttaccaac
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C C C T C     A
      T G A        G      | | | | |     G
    G       C T C G       G G G A G     C
    G             |                 T T
    A       C T A C
      C T A        G     CGGCGATTCGCCTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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