The detailed information of tRNA gene sequence


Sequence ID>A171002545
Genome IDCP002916
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon BRNA1 [CP002916]
Start position on genome 1373557
End posion on genome 1373481
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
attgataggc
tRNA gene sequence 
GGGCTTGTGAGGTAGCCAGGATTATCCTGCCGGCCTTCGGAGCCGACCACCCGGGTTCGA
ATCCCGGCAAGCCCTCCt
Downstream region at tRNA end position 
ggttttcgag
Secondary structure (Cloverleaf model)
>A171002545	Arg	TCG
                   c      TCCt ggttttcgag
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     T - A
                     G - C          T A
                    T     G G C C C     A
    C C G A        G      | | | | |     G
  A         T G G A       C C G G G     C
  G           | | |                 T T
  G         T C C T
    A T T A        G     CCAC
                    C   A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.-

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