The detailed information of tRNA gene sequence


Sequence ID>A171002549
Genome IDCP002916
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon BRNA1 [CP002916]
Start position on genome 1179408
End posion on genome 1179335
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ttcaacaact
tRNA gene sequence 
GGGCAGGTAGATCAGTTGGAAGATCGCTACATTGGCATTGTAGAGGTCGCGAGTTCGAAT
CTCGCCCTGTCCACtc
Downstream region at tRNA end position 
atttttcttg
Secondary structure (Cloverleaf model)
>A171002549	Ala	GGC
                   t      ACtc atttttcttg
                     G - C
                     G - C
                     G + T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C G C T C     A
      T G A        A      | | | | |     G
    T       C T A G       G C G A G     C
    G       | | | |                 T T
    G       G A T C
      A A          G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.-

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