The detailed information of tRNA gene sequence


Sequence ID>A171002556
Genome IDCP002916
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon BRNA1 [CP002916]
Start position on genome 516600
End posion on genome 516527
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gaaacaagtc
tRNA gene sequence 
GGGCCTGTGGGGTAGCTTGGTATCCTTGTGGCTTCGGGAGCCATTGACCTCGGTTCAAAT
CCGGGCAGGCCCACtc
Downstream region at tRNA end position 
ccactttttc
Secondary structure (Cloverleaf model)
>A171002556	Pro	CGG
                   c      ACtc ccactttttc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     G G G C C     A
      C G A        G      | + | | |     A
    T       T G G G       C T C G G     C
    T         | | +                 T T
    G       T C C T
      G T A        T     TGAC
                    G + T
                    T - A
                    G - C
                    G - C
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.-

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