The detailed information of tRNA gene sequence


Sequence ID>A171002557
Genome IDCP002916
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon BRNA1 [CP002916]
Start position on genome 408288
End posion on genome 408213
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
aaaacaattg
tRNA gene sequence 
GCTGGGATGGGGTAGCTTGGTTATCCTAGGAGACTGTGGATCTCTTGACTCGGGTTCAAA
TCTCGGTCCCGGCCCCt
Downstream region at tRNA end position 
cttttctttt
Secondary structure (Cloverleaf model)
>A171002557	His	GTG
                   g      CCCt cttttctttt
                     G - C
                     C - G
                     T + G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G G C T C     A
    T C G A        G      + | | + |     A
  T         T G G G       T C G G G     C
  G           | | +                 T T
  G         T C C T
    T T A          A     TGAC
                    G + T
                    G - C
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.-

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