The detailed information of tRNA gene sequence


Sequence ID>A171002642
Genome IDCP002921
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloarcula hispanica ATCC 33960 CGMCC 1.2049 [CP002921, CP002922]
Start position on genome 1399174
End posion on genome 1399100
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
atttgtgtac
tRNA gene sequence 
GCTCCGTTGGTGTAGTCCGGCCAATCATATCACCCTCTCACGGTGATGACTAGGGTTCAA
ATCCCTGACGGAGCAttt
Downstream region at tRNA end position 
ctctgcgatt
Secondary structure (Cloverleaf model)
>A171002642	Glu	CTC
                   c      Attt ctctgcgatt
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     G T C C C     A
    C T G A        G      + | | | |     A
  C         T G T G       T A G G G     C
  G           | | +                 T T
  G         T C A T
    C C A A        A     TGAC
                    T - A
                    C - G
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.-

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