The detailed information of tRNA gene sequence


Sequence ID>A171002643
Genome IDCP002921
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloarcula hispanica ATCC 33960 CGMCC 1.2049 [CP002921, CP002922]
Start position on genome 1227605
End posion on genome 1227534
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
cccagagtgc
tRNA gene sequence 
GGGACCGTGGGGTAGCGGTATCCTCGGCGGATGGGGTCCGTCGGACCTGAGTTCGAATCT
CGGCGGTCCCACtt
Downstream region at tRNA end position 
caaggctttg
Secondary structure (Cloverleaf model)
>A171002643	Pro	GGG
                   c      ACtt caaggctttg
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C          T A
                    T     G G C T C     A
        G A        G      | + | | |     G
      C     T G G G       C T G A G     C
      G       | | +                 T T
      G     T C C T
        T A        C     GGAC
                    G - C
                    G + T
                    C - G
                    G - C
                    G - C
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.-

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