The detailed information of tRNA gene sequence


Sequence ID>A171002695
Genome IDCP003050
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalovivax ruber XH-70 [CP003050]
Start position on genome 387300
End posion on genome 387375
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
cagtttgtag
tRNA gene sequence 
GGGCATGTAGCTCAGTCCGGATAGAGCGTCGGACTTCTAATCCGACGGTCGTGGGTTCGA
ATCCCATCATGCCCGCta
Downstream region at tRNA end position 
attctgttgc
Secondary structure (Cloverleaf model)
>A171002695	Arg	TCT
                   g      GCta attctgttgc
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     T - A
                     G - C          T A
                    T     T A C C C     A
    C T G A        A      + | | | |     G
  C         C T C G       G T G G G     C
  G         | | | |                 T T
  G         G A G C
    A T A          G     CGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.-

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