The detailed information of tRNA gene sequence


Sequence ID>A171002699
Genome IDCP003050
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalovivax ruber XH-70 [CP003050]
Start position on genome 990308
End posion on genome 990392
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
atgcattccc
tRNA gene sequence 
GCGAGGGTAGCCAAGCAAGGCCAACGGCGGTGGGCTTAAGACCCGCTCCCGTAGGGGTCC
TTGGGTTCAAATCCCAACCCTCGCAttt
Downstream region at tRNA end position 
gtgctgcgag
Secondary structure (Cloverleaf model)
>A171002699	Leu	TAA
                   c      Attt gtgctgcgag
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     A A C C C     A
    A C G A        A      | | | | |     A
  A         A C C G       T T G G G     C
  G           | | |                 T T
  G         C G G C
    C C A A        G     TCCCGTAGGGGTCC
                    G - C
                    T + G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.-

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